Brain Imaging · White Matter fMRI · Personalized Neuromodulation

Mapping brain networks for precision mental health.

The Ji Laboratory integrates multimodal MRI, BOLD signal dynamics, white matter functional imaging, brain connectomics, and personalized non-invasive neuromodulation to understand human brain disorders and develop clinically translatable interventions.

37H-index
2025Rising Star of Science Award
3NSFC grants as PI
2Research software platforms
Principal Investigator

Prof. Gong-Jun Ji

Cognitive neuroscientist and clinician-scientist focused on translational neuroimaging, abnormal psychology, and network-guided brain stimulation.

PI Photo

Gong-Jun Ji, Ph.D.

Professor · Anhui Medical University
Email: jigongjun@163.com
Institution: Anhui Medical University, China
Address: No. 18, Meishan Rd., Hefei, Anhui, China

Research Vision

Prof. Gong-Jun Ji leads translational research at the intersection of cognitive neuroscience, clinical psychiatry, functional MRI, brain networks, and personalized neuromodulation. His work has helped establish white matter fMRI as an emerging direction for understanding brain function beyond traditional gray matter-centered models.

The laboratory develops theoretical frameworks, computational methods, and software tools for imaging brain white matter function, identifying disorder-related network mechanisms, and guiding individualized transcranial magnetic stimulation for mental health conditions.

White Matter fMRI Brain Connectomics BOLD Signal Dynamics TMS Navigation Translational Psychiatry Precision Neuromodulation
2010–2013 Ph.D. in Cognitive Neuroscience, Beijing Normal University
2008–2010 Master's degree in Neuroanatomy, Bengbu Medical College
2003–2007 Bachelor's degree in Nursing, Bengbu Medical College
Research Programs

From BOLD signals to personalized brain stimulation

We combine neuroimaging, network neuroscience, computational modeling, and clinical translation to study the biological basis of abnormal psychological states and brain disorders.

🧠

White Matter fMRI

Developing analytical methods and theoretical frameworks for imaging functional activity and connectivity in human brain white matter.

〰️

BOLD Signal Dynamics

Characterizing temporal dynamics, variability, and physiological mechanisms of resting-state and task-related BOLD signals.

🔗

Brain Network Science

Mapping functional and structural connectomes to reveal network mechanisms underlying cognition, behavior, and psychiatric symptoms.

🎯

Personalized TMS

Building patient-specific targeting strategies for repetitive transcranial magnetic stimulation using individual brain networks and clinical phenotypes.

⚕️

Translational Psychiatry

Investigating schizophrenia, depression, auditory verbal hallucinations, epilepsy, and other brain disorders through imaging-guided clinical studies.

🤖

AI for Neuroimaging

Applying machine learning and computational modeling to discover imaging biomarkers and support precision diagnosis and treatment.

Open Tools

Software platforms for the neuroimaging community

The laboratory develops practical research tools that support personalized TMS navigation and specialized white matter fMRI analysis.

TMS Navigation

TMStarget

A personalized TMS navigation platform designed to support individualized target localization and network-guided neuromodulation. The platform is available through the free cloud service yun.unistim.cn.

White Matter fMRI

WhiteMatterSF

A specialized analysis package for white matter fMRI data, supporting researchers who study functional signals, connectivity patterns, and network organization in white matter.

Selected Publications

Representative work

Publications span high-impact neuroscience, psychiatry, radiology, brain stimulation, and computational neuroimaging journals.

Nature Communications · 2026

Distinct antidepressant therapies act on a common brain network

Gong-Jun Ji*, Wenqiang Xu*, Juan Zhang*, Qianqian Li*, et al. Accepted.

Molecular Psychiatry · 2026

Developmental changes of the white matter functional connectome

Guozheng Feng, Kexin Wang, Yichen Wang, Guolin Ma, Jian Cheng, Vince D. Calhoun, Kai Wang, Gong-Jun Ji#, Ni Shu#.

Biological Psychiatry · 2026

A common network of emotional processing recovery across four psychiatric disorders

Yueling Liu*, Wenqiang Xu*, Xiya Zhao*, et al.; Gong-Jun Ji#.

Nature Communications · 2025

A generalized epilepsy network derived from brain abnormalities and deep brain stimulation

Gong-Jun Ji*, Michael D. Fox*, Mae Morton-Dutton, et al.

JAMA Network Open · 2024

Repetitive Transcranial Magnetic Stimulation for Auditory Verbal Hallucination in Schizophrenia Patients

Qiang Hua, Lu Wang, Kongliang He, Jinmei Sun, Wenqiang Xu, et al.

Nature Mental Health · 2023

White matter dysfunction in psychiatric disorders is associated with neurotransmitter and genetic profiles

Gong-Jun Ji#, Jinmei Sun#, Qiang Hua, Li Zhang, Ting Zhang, et al.

Science Bulletin · 2025

Imaging brain white matter function using resting-state functional MRI

Gong-Jun Ji, Zaixu Cui, Ryan C.N. D'Arcy, Wei Liao, Bharat Biswal, Qing Zhang, et al.

Brain Stimulation · 2024

Comparative Study of Accelerated High-Dose and Low-Dose Magnetic Stimulation for Freezing of Gait in Parkinson's Disease

Jinmei Sun#, Xin Chen#, Jinying Han, Mengqi Wang, Ziye Zhao, Lili Hu, Gong-Jun Ji*, Kai Wang*, Panpan Hu*.

Grant Support

National research funding

The laboratory has received continuous support from the National Natural Science Foundation of China.

2023

NSFC 82371507
Personalized pathological feature-guided brain network mechanism and rTMS for schizophrenia.

Total cost: ¥490,000

2019

NSFC 81971689
Network mechanism of auditory verbal hallucination and repetitive TMS treatment.

Total cost: ¥550,000

2014

NSFC 81401400
Pathophysiology mechanism of memory impairment in children with Rolandic epilepsy.

Total cost: ¥230,000

People

Team members

A collaborative team of clinicians, neuroscientists, engineers, students, and research staff.

Gong-Jun Ji

Principal Investigator

Qiang Hua

Researcher

Meng Yao

Graduate Researcher

Wenqiang Xu

Researcher

News & Updates

Recent highlights

Replace these placeholder items with your laboratory news, awards, publications, conferences, and student achievements.

Nature Communications paper accepted

Work on common brain networks of antidepressant therapies accepted by Nature Communications.

Rising Star of Science Award

Prof. Ji recognized with the Research.com Rising Star of Science Award.

White matter fMRI review published

Perspective on imaging brain white matter function using resting-state fMRI published in Science Bulletin.

Join Us

We welcome motivated students and collaborators

We are looking for students, postdoctoral researchers, clinicians, engineers, and collaborators interested in brain imaging, BOLD signals, white matter fMRI, connectomics, TMS, and computational psychiatry.

Email: jigongjun@163.com Anhui Medical University Hefei, Anhui, China